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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs4446934 chr1:224381403 C/T 0.000115 490 16.65 14.8 13.8 KM Plot
THCA rs4456074 chr1:166847646 A/G 0.000208 473 18.3 16.27 15.48 KM Plot
THCA rs4471924 chr2:54584738 C/G 0.000262 486 21.02 15.17 15.97 KM Plot
THCA rs4473647 chr4:84159408 C/G 0.000184 484 15.67 16.5 14 KM Plot
THCA rs4479391 chr2:29166753 A/G 0.00011 490 14.3 15.22 16.07 KM Plot
THCA rs4480537 chr11:4168335 G/A 5.66E-6 485 18.33 15.23 16.22 KM Plot
THCA rs4491178 chr11:93821227 A/G 4.82E-5 487 15.67 16.73 8.42 KM Plot
THCA rs4492817 chr11:4161942 A/T 1.74E-7 490 19.05 13.9 16.38 KM Plot
THCA rs4497658 chr15:41264283 C/T 0.000261 481 15.13 16.18 17.33 KM Plot
THCA rs4509624 chr1:91856058 T/A 7.88E-6 489 15.68 17 17.77 KM Plot
THCA rs4520539 chr10:81740529 C/G 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs4533193 chr14:78380168 C/T 2.2E-5 476 15.33 17.42 13.77 KM Plot
THCA rs4538160 chr2:29167833 T/C 0.00011 490 14.3 15.22 16.07 KM Plot
THCA rs45448393 chr6:24418960 C/A 5.33E-15 489 16.33 14.85 11.07 KM Plot
THCA rs45449600 chr1:74811910 C/A 5.13E-9 490 15.93 16.4 15.3 KM Plot